PPDB

PPDB	The Plant Proteome Database

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AT1G60970.1 SNARE-like superfamily protein

Lab Annot.

Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G09800.1 11 Arabidopsis thaliana 3E-93 172 75 86 2 (0) _
AT3G09800.5 11 Arabidopsis thaliana 3E-93 172 75 86 0 (0) _
AT3G09800.4 11 Arabidopsis thaliana 3E-93 172 75 86 0 (0) _
Os02g21250.1 7 Oryza sativa 1E-89 176 71 84 20 (20) _
Os02g21250.2 7 Oryza sativa 1E-89 176 71 84 9 (9) _
Os05g38610.1 7 Oryza sativa 6E-85 176 69 80 20 (20) _
GRMZM2G314679_P06 3.21 Zea mays 9E-91 176 72 82 52 (24) _
v1_GRMZM2G314679_P06 4a53 Zea mays 9E-91 176 72 82 29 (28) _
Zm00001eb315530_P001 agpv5 Zea mays 1E-90 176 72 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clat_adaptor_s(1) Ribonuc_L-PSP(2)
TargetP:	Cytoplasm (Class 2 C0.077; M0.119; S0.053; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	177 aa (-cTP 127)
Molecular Weight	19.62 kDA(-cTP )
PI	4.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data