PPDB

The Plant Proteome Database

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AT1G60920.1   AGAMOUS-like 55

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60880.1 11Arabidopsis thaliana9E-8019568790 (0)_
AT1G46408.1 11Arabidopsis thaliana7E-4312755781 (1)_
AT5G04640.1 11Arabidopsis thaliana1E-4012953750 (0)_
Os12g21850.1 7Oryza sativa3E-127146670 (0)_
Os09g02830.1 7Oryza sativa4E-118835560 (0)M
Os01g74440.1 7Oryza sativa4E-107538600 (0)_
AC234185.1_FGP006 3.21Zea mays8E-1514934500 (0)_
Zm00001eb344240_P001 agpv5Zea mays8E-1514934500 (0)_
v1_AC234185.1_FGP006 4a53Zea mays8E-1514934500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Proteasom_Rpn13(2) SRF-TF(1)
TargetP: Cytoplasm (Class 2 C0.113; M0.110; S0.010; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 191 aa (-cTP 123)
Molecular Weight 21.50 kDA(-cTP )
PI 6.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help