PPDB

 The Plant Proteome Database

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AT1G60900.1   U2 snRNP auxilliary factor%2C large subunit%2C splicing factor
Lab Annot.
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G36690.4 11Arabidopsis thaliana053967754 (1)_
AT4G36690.1 11Arabidopsis thaliana055565734 (1)_
AT4G36690.2 11Arabidopsis thaliana049063714 (1)_
Os11g45590.1 7Oryza sativa040575855 (5)_
Os11g45590.2 7Oryza sativa040575855 (5)_
Os11g41820.1 7Oryza sativa0386748411 (11)_
Zm00001eb166260_P005 agpv5Zea mays040575850 (0)_
v1_GRMZM2G093256_P04 4a53Zea mays0405758528 (28)_
GRMZM5G813627_P02 3.21Zea mays0405758570 (28)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: RRM_1(4) RRM_7(2) RRM_occluded(2)
TargetP: Cytoplasm (Class 2 C0.138; M0.115; S0.093; _0.891)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 589 aa (-cTP 577)
Molecular Weight 66.32 kDA(-cTP )
PI 9.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help