PPDB

PPDB	The Plant Proteome Database

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AT1G60850.1 DNA-directed RNA polymerase family protein

Lab Annot.

ATRPAC42
Mapman: 27.2 RNA.transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G60850.2 11 Arabidopsis thaliana 0 375 100 100 0 (0) _
AT1G60850.4 11 Arabidopsis thaliana 0 375 100 100 0 (0) _
AT1G60850.3 11 Arabidopsis thaliana 0 274 100 100 0 (0) _
Os03g18410.1 7 Oryza sativa 2E-146 355 61 72 0 (0) _
Os02g49180.1 7 Oryza sativa 1E-85 376 43 52 0 (0) _
Os09g02284.1 7 Oryza sativa 5E-33 319 29 48 9 (9) M
Zm00001eb209340_P001 agpv5 Zea mays 4E-141 357 59 72 0 (0) _
GRMZM2G025356_P01 3.21 Zea mays 4E-141 357 59 72 3 (2) _
v1_GRMZM2G025356_P01 4a53 Zea mays 4E-141 357 59 72 12 (12) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2815(2) ETF_QO(1) Fer4(2) Fer4_7(1) Fer4_9(1) RNA_pol_A_bac(1) RNA_pol_L(1)
TargetP:	Cytoplasm (Class 3 C0.155; M0.153; S0.125; _0.738)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	375 aa (-cTP 318)
Molecular Weight	41.78 kDA(-cTP )
PI	5.48(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
21173025(root proteome)

Comparative Proteomics Data