PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G60780.1 Clathrin adaptor complexes medium subunit family protein

Lab Annot.

clathrin adaptor complexes medium subunit protein
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G10730.1 11 Arabidopsis thaliana 0 428 92 96 3 (3) M
AT5G46630.1 11 Arabidopsis thaliana 1E-125 440 42 62 26 (16) _
AT5G46630.2 11 Arabidopsis thaliana 1E-112 416 40 61 22 (12) _
Os01g50770.1 7 Oryza sativa 0 429 88 96 2 (2) M
Os05g46550.1 7 Oryza sativa 0 428 85 94 1 (1) M
Os01g50770.2 7 Oryza sativa 0 356 88 97 1 (1) M
GRMZM2G436835_P02 3.21 Zea mays 0 429 88 96 66 (10) M
Zm00001eb361080_P004 agpv5 Zea mays 0 429 86 94 0 (0) M
Zm00001eb155580_P001 agpv5 Zea mays 0 428 85 92 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adap_comp_sub(1) Clat_adaptor_s(1) muHD(2)
TargetP:	Mitochondria (Class 4 C0.011; M0.659; S0.158; _0.304)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	428 aa (-cTP 359)
Molecular Weight	49.03 kDA(-cTP )
PI	6.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1535	Detail								leaf [A. thaliana]		wild-type
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data