PPDB

PPDB	The Plant Proteome Database

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AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G02370.1 11 Arabidopsis thaliana 3E-100 456 36 58 0 (0) M
AT4G01990.1 11 Arabidopsis thaliana 5E-89 478 34 56 0 (0) M
AT1G02150.1 11 Arabidopsis thaliana 4E-81 401 34 55 169 (64) M
Os04g25410.1 7 Oryza sativa 0 521 56 69 3 (3) M
Os01g19490.1 7 Oryza sativa 5E-96 467 35 58 1 (1) S
Os04g46010.1 7 Oryza sativa 4E-92 434 35 56 31 (31) C
v1_GRMZM2G350319_P02 4a53 Zea mays 0 533 54 68 1 (1) M
GRMZM2G350319_P02 3.21 Zea mays 0 533 54 68 1 (1) M
Zm00001eb378440_P001 agpv5 Zea mays 0 533 54 68 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Mtf2(3) NatB_MDM20(4) PPR(8) PPR_1(5) PPR_2(9) PPR_3(5) PPR_long(4) RabGAP-TBC(3
TargetP:	Cytoplasm (Class 5 C0.053; M0.613; S0.019; _0.619)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	491 aa (-cTP 477)
Molecular Weight	55.90 kDA(-cTP )
PI	8.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data