PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G60690.1   NAD(P)-linked oxidoreductase superfamily protein

Lab Annot. aldo/keto reductase protein
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60710.1 11Arabidopsis thaliana0344869355 (42)_
AT1G60730.1 11Arabidopsis thaliana034487937 (6)_
AT1G60680.1 11Arabidopsis thaliana0345849312 (12)M
Os04g26910.1 7Oryza sativa0341748825 (25)M
Os04g27060.1 7Oryza sativa034370851 (1)M
Os04g26870.1 7Oryza sativa3E-17833969841 (1)_
GRMZM2G020631_P01 3.21Zea mays033875870 (0)_
Zm00001eb037000_P001 agpv5Zea mays033875870 (0)_
v1_GRMZM2G020631_P01 4a53Zea mays033875879 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aldo_ket_red(1)
TargetP: Mitochondria (Class 4 C0.033; M0.637; S0.058; _0.356)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 345 aa (-cTP 325)
Molecular Weight 38.16 kDA(-cTP )
PI 5.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
17644812(plasma membrane - suspension cells)
19888209(leaves)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help