PPDB

PPDB	The Plant Proteome Database

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AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G60650.2 11 Arabidopsis thaliana 0 292 100 100 1 (0) _
AT1G60650.3 11 Arabidopsis thaliana 3E-176 251 99 99 0 (0) _
AT1G60650.4 11 Arabidopsis thaliana 2E-175 249 100 100 0 (0) M
Os07g08960.1 7 Oryza sativa 8E-45 310 40 49 26 (26) _
Os03g47800.1 7 Oryza sativa 6E-44 318 39 47 11 (11) _
Os03g61990.3 7 Oryza sativa 2E-24 137 36 60 23 (23) _
Zm00001eb217310_P001 agpv5 Zea mays 4E-56 321 42 50 0 (0) _
v1_GRMZM2G161242_P01 4a53 Zea mays 4E-56 321 42 50 21 (21) _
GRMZM2G161242_P01 3.21 Zea mays 4E-56 321 42 50 8 (8) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RRM_1(1) RRM_7(1) zf-CCHC(1) zf-CCHC_2(1) zf-CCHC_3(2) zf-CCHC_5(1)
TargetP:	Cytoplasm (Class 2 C0.111; M0.162; S0.089; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	292 aa (-cTP 250)
Molecular Weight	34.40 kDA(-cTP )
PI	8.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data