PPDB

The Plant Proteome Database

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AT1G60620.1   RNA polymerase I subunit 43

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60620.2 11Arabidopsis thaliana03201001000 (0)_
AT1G60850.2 11Arabidopsis thaliana037372810 (0)_
AT1G60850.1 11Arabidopsis thaliana037372810 (0)_
Os03g18410.1 7Oryza sativa1E-16038161740 (0)_
Os02g49180.1 7Oryza sativa7E-10138146560 (0)_
Os09g02284.1 7Oryza sativa1E-2930329489 (9)M
Zm00001eb209340_P001 agpv5Zea mays2E-16236363750 (0)_
GRMZM2G025356_P01 3.21Zea mays2E-16236363753 (2)_
v1_GRMZM2G025356_P01 4a53Zea mays2E-162363637512 (12)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fer4_7(1) RNA_pol_A_bac(1) RNA_pol_L(1)
TargetP: Cytoplasm (Class 3 C0.285; M0.089; S0.031; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 385 aa (-cTP 312)
Molecular Weight 43.37 kDA(-cTP )
PI 5.70(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help