PPDB

 The Plant Proteome Database

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AT1G60550.1   enoyl-CoA hydratase/isomerase D
Lab Annot. Enoyl-CoA hydratase/isomerase (menB), part of the PHYLLO locus dually targeted plastid and peroxisome
Mapman: 18.5.2.5 Co-factor and vitamine metabolism.vitamine K. naphthoate synthase
Curated Location peroxisome (Pubmed: 23198870 20150517 21472859 )
plastid (Pubmed: 23198870 20150517 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G16210.1 11Arabidopsis thaliana3E-28228355042 (31)_
AT4G16800.1 11Arabidopsis thaliana6E-26265284612 (6)M
AT5G43280.1 11Arabidopsis thaliana8E-1427128427 (4)_
Os01g47350.1 7Oryza sativa1E-51165587216 (16)M
Os02g43720.1 7Oryza sativa9E-2726630470 (0)M
Os03g19680.1 7Oryza sativa4E-2620434510 (0)M
Zm00001eb157640_P005 agpv5Zea mays3E-17734073820 (0)M
GRMZM2G060156_P01 3.21Zea mays3E-177340738214 (13)M
v1_GRMZM2G060156_P01 4a53Zea mays3E-177340738226 (26)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Carboxyl_trans(1) ECH_1(1) ECH_2(1) Peptidase_S49(2) SDH_sah(2)
TargetP: Cytoplasm (Class 5 C0.286; M0.250; S0.094; _0.399)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 337 aa (-cTP 307)
Molecular Weight 37.06 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 17951448(peroxisome (leaves))
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data

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