PPDB

PPDB	The Plant Proteome Database

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AT1G60390.1 polygalacturonase 1

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G70370.1 11 Arabidopsis thaliana 0 627 65 76 0 (0) S
AT1G70370.2 11 Arabidopsis thaliana 0 627 65 76 0 (0) S
AT1G23760.1 11 Arabidopsis thaliana 0 619 64 75 0 (0) M
Os08g29200.1 7 Oryza sativa 0 607 49 62 0 (0) S
Os09g16010.1 7 Oryza sativa 4E-160 612 44 57 0 (0) M
Os10g26940.1 7 Oryza sativa 2E-78 258 48 67 0 (0) S
GRMZM2G147756_P01 3.21 Zea mays 0 617 48 62 0 (0) M
GRMZM2G146665_P01 3.21 Zea mays 0 618 48 61 0 (0) C
Zm00001eb310130_P001 agpv5 Zea mays 0 618 48 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BURP(1)
TargetP:	Secreted (Class 2 C0.068; M0.009; S0.812; _0.025)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	624 aa (-cTP 581)
Molecular Weight	67.76 kDA(-cTP )
PI	6.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data