PPDB

PPDB	The Plant Proteome Database

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AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein

Lab Annot.

pre-mRNA processing ribonucleoprotein binding region-containing protein
Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G70400.1 11 Arabidopsis thaliana 1E-75 180 70 80 0 (0) _
AT1G70400.2 11 Arabidopsis thaliana 5E-72 167 72 81 0 (0) _
AT1G70400.3 11 Arabidopsis thaliana 3E-71 167 72 81 0 (0) _
Os04g46890.2 6 Oryza sativa 0 486 74 84 0 (0) _
Os07g04850.2 7 Oryza sativa 0 485 74 84 0 (0) _
Os07g04850.1 7 Oryza sativa 0 485 74 84 0 (0) _
v1_GRMZM2G003307_P01 4a53 Zea mays 0 485 75 84 14 (14) _
GRMZM2G003307_P02 3.21 Zea mays 0 485 75 84 0 (0) _
GRMZM2G003307_P01 3.21 Zea mays 0 485 75 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nop(1) Prp31_C(2)
TargetP:	Cytoplasm (Class 3 C0.173; M0.095; S0.204; _0.796)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	485 aa (-cTP 466)
Molecular Weight	52.64 kDA(-cTP )
PI	5.59(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data