PPDB

PPDB	The Plant Proteome Database

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AT1G60070.1 Adaptor protein complex AP-1%2C gamma subunit

Lab Annot.

Adaptor protein complex AP-1, gamma subunit
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G60070.2 11 Arabidopsis thaliana 0 898 95 95 17 (10) M
AT1G23900.1 11 Arabidopsis thaliana 0 876 74 85 73 (32) M
AT1G23900.2 11 Arabidopsis thaliana 0 876 74 85 73 (32) M
Os06g07090.1 7 Oryza sativa 0 876 69 83 34 (34) _
Os06g07090.2 7 Oryza sativa 0 876 69 83 34 (34) _
Os02g56110.1 7 Oryza sativa 0 900 62 75 18 (18) _
GRMZM2G017421_P02 3.21 Zea mays 0 879 69 83 6 (6) _
GRMZM2G017421_P01 3.21 Zea mays 0 879 69 83 6 (6) _
Zm00001eb271590_P003 agpv5 Zea mays 0 879 69 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(1) Alpha_adaptinC2(1) Arm(3) Cnd1(2) HEAT_2(3) Nipped-B_C(1) V-ATPase_
TargetP:	Mitochondria (Class 5 C0.142; M0.456; S0.081; _0.360)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	862 aa (-cTP 844)
Molecular Weight	94.67 kDA(-cTP )
PI	5.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data