PPDB

PPDB	The Plant Proteome Database

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AT1G60010.1 D-ribose-binding periplasmic protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G10530.1 11 Arabidopsis thaliana 2E-74 177 69 75 0 (0) M
AT5G62900.1 11 Arabidopsis thaliana 6E-42 180 42 64 0 (0) _
AT5G50090.1 11 Arabidopsis thaliana 4E-40 175 46 61 0 (0) _
Os06g12960.1 7 Oryza sativa 3E-37 191 38 59 0 (0) M
Os02g50810.1 7 Oryza sativa 4E-37 193 36 54 0 (0) C
Os08g32520.1 7 Oryza sativa 2E-34 189 37 55 0 (0) _
Zm00001eb194700_P001 agpv5 Zea mays 1E-39 182 41 59 0 (0) M
GRMZM2G036282_P01 3.21 Zea mays 1E-39 182 41 59 0 (0) M
v1_GRMZM2G036282_P01 4a53 Zea mays 1E-39 182 41 59 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ctr(1) DUF4228(1) Presenilin(1) Ribos_L4_asso_C(1) Sec62(1) Zip(1)
TargetP:	Cytoplasm (Class 3 C0.043; M0.215; S0.152; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	173 aa (-cTP 80)
Molecular Weight	19.60 kDA(-cTP )
PI	9.71(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)
19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data