PPDB

PPDB	The Plant Proteome Database

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AT1G59970.1 Matrixin family protein

Lab Annot.

matrix metalloproteinase MMP-5
Mapman: 29.5.7.2.2* protein.degradation.metalloprotease.MA(M).M10

Curated Location

TAIR curated location: anchored to membrane12068095,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G24140.1 11 Arabidopsis thaliana 9E-144 352 57 69 0 (0) S
AT1G70170.1 11 Arabidopsis thaliana 1E-141 373 54 71 0 (0) S
AT4G16640.1 11 Arabidopsis thaliana 1E-79 326 41 58 0 (0) M
Os02g50730.1 7 Oryza sativa 7E-97 324 48 61 0 (0) S
Os06g13180.1 7 Oryza sativa 2E-91 320 47 61 0 (0) S
Os10g40830.1 7 Oryza sativa 1E-76 328 40 57 0 (0) S
Zm00001eb371880_P001 agpv5 Zea mays 4E-93 294 50 64 0 (0) S
v1_GRMZM2G110220_P01 4a53 Zea mays 4E-93 294 50 64 0 (0) S
GRMZM2G110220_P01 3.21 Zea mays 4E-93 294 50 64 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Astacin(2) DUF4953(1) Metallopep(1) Peptidase_M10(1) Peptidase_M54(1) PG_binding
TargetP:	Secreted (Class 1 C0.037; M0.063; S0.936; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	360 aa (-cTP 335)
Molecular Weight	39.76 kDA(-cTP )
PI	6.72(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data