PPDB

 The Plant Proteome Database

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AT1G59960.1   NAD(P)-linked oxidoreductase superfamily protein
Lab Annot. aldo/keto reductase
Mapman: 16.8.2 secondary metabolism.flavonoids.chalcones
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G59950.1 11Arabidopsis thaliana031186920 (0)S
AT5G62420.1 11Arabidopsis thaliana8E-7930941620 (0)M
AT2G37790.1 11Arabidopsis thaliana2E-78306416014 (12)_
Os03g13390.2 7Oryza sativa2E-12830756730 (0)_
Os10g02380.1 7Oryza sativa2E-11730751711 (1)_
Os10g02490.2 7Oryza sativa3E-11332050700 (0)C
GRMZM2G060952_P01 3.21Zea mays6E-13030757731 (1)M
Zm00001eb010040_P003 agpv5Zea mays6E-13030757730 (0)M
v1_GRMZM2G060952_P01 4a53Zea mays6E-13030757732 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aldo_ket_red(1)
TargetP: Mitochondria (Class 5 C0.325; M0.339; S0.042; _0.308)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 326 aa (-cTP 297)
Molecular Weight 36.73 kDA(-cTP )
PI 6.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1519Detail       leaf [A. thaliana] wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2316Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 17916636(root (NaCl stress))
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help