PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G59750.1   auxin response factor 1

Lab Annot.
Mapman: 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G59750.3 11Arabidopsis thaliana06651001002 (2)_
AT1G59750.2 11Arabidopsis thaliana066599992 (2)_
AT1G59750.4 11Arabidopsis thaliana066599990 (0)_
Os02g35140.1 7Oryza sativa063863740 (0)_
Os04g36054.1 7Oryza sativa064663750 (0)_
Os01g13520.1 7Oryza sativa070145580 (0)_
GRMZM2G702026_P01 3.21Zea mays066061730 (0)_
Zm00001eb243930_P001 agpv5Zea mays066061730 (0)_
Zm00001eb082150_P003 agpv5Zea mays066059710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AUX_IAA(1) Auxin_resp(1) B3(3)
TargetP: Cytoplasm (Class 4 C0.312; M0.084; S0.076; _0.611)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 665 aa (-cTP 663)
Molecular Weight 73.67 kDA(-cTP )
PI 5.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1091Detail        [A. thaliana] R4Strep Complemented

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help