PPDB

PPDB	The Plant Proteome Database

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AT1G59720.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

DYW-containing PPR protein CRR28
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid stroma (Pubmed: 23198870 19182104 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G21065.1 11 Arabidopsis thaliana 2E-166 586 44 63 0 (0) S
AT5G66520.1 11 Arabidopsis thaliana 2E-156 624 40 58 4 (4) _
AT1G08070.2 11 Arabidopsis thaliana 8E-155 554 43 61 0 (0) S
Os07g09370.1 7 Oryza sativa 0 513 55 71 0 (0) C
Os07g05560.1 7 Oryza sativa 8E-152 607 41 58 0 (0) M
Os03g58100.1 7 Oryza sativa 1E-150 628 41 59 0 (0) C
v1_GRMZM2G144843_P01 4a53 Zea mays 0 456 57 74 2 (2) C
GRMZM2G144843_P01 3.21 Zea mays 0 456 57 74 6 (6) C
Zm00001eb116480_P001 agpv5 Zea mays 0 456 57 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(9) PPR_1(10) PPR_2(7) PPR_3(5) PYRIN(2) TPR_14(3)
TargetP:	Chloroplast (Class 5 C0.336; M0.210; S0.042; _0.273)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	638 aa (-cTP 598)
Molecular Weight	71.96 kDA(-cTP 67.68)
PI	6.90(-cTP 6.73)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data