PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G59640.1   transcription factor BIG PETAL P (BPE)

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G59640.2 11Arabidopsis thaliana6E-16425191910 (0)_
AT5G62610.1 11Arabidopsis thaliana3E-5928042560 (0)C
AT5G62610.2 11Arabidopsis thaliana3E-5928042560 (0)C
Os03g58830.1 7Oryza sativa1E-6913676860 (0)_
Os07g09590.1 7Oryza sativa2E-6613773830 (0)_
Os09g32510.5 7Oryza sativa2E-458681930 (0)_
GRMZM2G137358_P01 3.21Zea mays3E-7120459700 (0)C
v1_GRMZM2G137358_P01 4a53Zea mays3E-7120459700 (0)C
Zm00001eb061300_P002 agpv5Zea mays3E-7120459700 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 3 C0.308; M0.111; S0.059; _0.730)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 264 aa (-cTP 214)
Molecular Weight 29.18 kDA(-cTP )
PI 5.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help