PPDB

PPDB	The Plant Proteome Database

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AT1G59560.1 E3 Ubiquitin ligase family protein

Lab Annot.

SPL1-like (E3 Ubiquitin ligase)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

envelope-outer (Pubmed: 23118188 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G59560.3 11 Arabidopsis thaliana 0 305 100 100 0 (0) M
AT1G59560.2 11 Arabidopsis thaliana 0 282 99 99 0 (0) M
AT1G59560.4 11 Arabidopsis thaliana 0 264 100 100 0 (0) M
Os07g45350.1 7 Oryza sativa 2E-108 350 48 66 0 (0) M
Os07g45350.2 7 Oryza sativa 2E-108 350 48 66 0 (0) M
Os07g45350.4 7 Oryza sativa 7E-83 273 48 66 0 (0) _
Zm00001eb329440_P006 agpv5 Zea mays 7E-109 350 47 66 0 (0) S
GRMZM2G020574_P08 3.21 Zea mays 7E-109 350 47 66 12 (12) S
Zm00001eb329440_P007 agpv5 Zea mays 2E-108 348 47 66 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5516(1) GIDE(1) Prok-RING_4(1) zf-C3HC4_3(1) zf-RING_2(1)
TargetP:	Mitochondria (Class 4 C0.009; M0.510; S0.290; _0.219)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	338 aa (-cTP 306)
Molecular Weight	37.73 kDA(-cTP )
PI	9.17(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data