PPDB

 The Plant Proteome Database

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AT1G58470.1   RNA-binding protein 1
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G58470.2 11Arabidopsis thaliana03601001000 (0)_
AT5G55550.5 11Arabidopsis thaliana8E-5720049680 (0)_
AT5G55550.1 11Arabidopsis thaliana8E-5720049680 (0)_
Os07g39560.3 7Oryza sativa8E-5519949660 (0)_
Os07g39560.1 7Oryza sativa8E-5519949660 (0)_
Os07g39560.2 7Oryza sativa8E-5519949660 (0)_
Zm00001eb222000_P005 agpv5Zea mays4E-5819951680 (0)_
Zm00001eb222000_P002 agpv5Zea mays4E-5819951680 (0)_
GRMZM2G167505_P03 3.21Zea mays4E-58199516814 (14)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: OB_RNB(2) RRM_1(2) RRM_3(2) RRM_7(2) RRM_8(1)
TargetP: Cytoplasm (Class 2 C0.019; M0.139; S0.211; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 360 aa (-cTP 328)
Molecular Weight 40.34 kDA(-cTP )
PI 8.32(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help