PPDB

The Plant Proteome Database

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AT1G58450.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 29.6 protein.folding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25230.1 11Arabidopsis thaliana1E-421605371199 (56)_
AT3G25230.2 11Arabidopsis thaliana1E-421565371197 (54)_
AT5G48570.1 11Arabidopsis thaliana8E-4215648720 (0)_
Os04g28420.1 7Oryza sativa3E-4816353713 (3)_
Os04g28420.2 7Oryza sativa3E-4816353713 (3)_
Os08g41390.2 7Oryza sativa2E-46156547451 (51)_
Zm00001eb036130_P002 agpv5Zea mays4E-4815655750 (0)_
Zm00001eb036130_P004 agpv5Zea mays4E-4815655750 (0)_
GRMZM2G096585_P04 3.21Zea mays4E-48156557567 (62)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Alkyl_sulf_dimr(2) CoV_NSP8(2) DUF1326(1) DUF5588(2) Fis1_TPR_C(3) SNAP(1) TPR_1
TargetP: Cytoplasm (Class 1 C0.026; M0.117; S0.055; _0.970)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 156)
Molecular Weight 18.68 kDA(-cTP )
PI 8.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help