PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G58330.1   transcription factor-like protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09950.1 11Arabidopsis thaliana3E-8622456750 (0)S
AT4G18650.1 11Arabidopsis thaliana2E-2322029500 (0)S
AT5G10030.1 11Arabidopsis thaliana2E-2118732521 (1)_
Os01g20030.1 7Oryza sativa2E-2023028440 (0)M
Os01g06560.1 7Oryza sativa2E-1624828420 (0)C
Os01g59350.1 7Oryza sativa1E-1421225460 (0)M
GRMZM2G051522_P01 3.21Zea mays3E-1922530480 (0)_
Zm00001eb339990_P001 agpv5Zea mays3E-1922530480 (0)_
Zm00001eb130290_P001 agpv5Zea mays2E-1722528460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DOG1(1) NFACT-C(2)
TargetP: Secreted (Class 5 C0.118; M0.126; S0.398; _0.253)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 225 aa (-cTP 183)
Molecular Weight 25.94 kDA(-cTP )
PI 5.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help