PPDB

The Plant Proteome Database

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AT1G58210.1   EMBRYO DEFECTIVE protein

Lab Annot. kinase interacting protein
Mapman: 29.4 protein.postranslational modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G02520.3 11Arabidopsis thaliana4E-149441590 (0)_
AT5G02520.1 11Arabidopsis thaliana5E-149441590 (0)_
AT5G02520.2 11Arabidopsis thaliana5E-149441590 (0)_
Os04g28040.1 7Oryza sativa3E-129140570 (0)C
Os01g34610.1 7Oryza sativa9E-099040520 (0)_
Os01g34610.2 7Oryza sativa1E-089040520 (0)_
GRMZM2G100107_P01 3.21Zea mays1E-0615228400 (0)C
Zm00001eb310180_P001 agpv5Zea mays1E-0615228400 (0)C
v1_GRMZM2G100107_P01 4a53Zea mays1E-0615228400 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SANTA(1)
TargetP: Chloroplast (Class 4 C0.524; M0.228; S0.014; _0.147)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 281 aa (-cTP 217)
Molecular Weight 31.56 kDA(-cTP 24.70)
PI 8.84(-cTP 6.62)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


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