PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G58180.3   beta carbonic anhydrase 6
Lab Annot. beta carbonic anhydrase 6 (CA6)
Mapman: 8.3 TCA / org.transformation.carbonic anhydrases
Curated Location mitochondria (Pubmed: 17407539 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G58180.2 11Arabidopsis thaliana02391001002 (2)M
AT1G58180.4 11Arabidopsis thaliana02391001002 (2)M
AT1G58180.7 11Arabidopsis thaliana02391001000 (0)_
Os09g28910.4 7Oryza sativa2E-8024348676 (6)_
Os09g28910.3 7Oryza sativa2E-8024348676 (6)_
Os09g28910.2 7Oryza sativa1E-7924348676 (6)C
GRMZM2G145101_P01 3.21Zea mays1E-8124048673 (3)_
v1_GRMZM2G145101_P01 4a53Zea mays1E-8124048674 (4)_
Zm00001eb315340_P001 agpv5Zea mays1E-8124048670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pro_CA(1)
TargetP: Cytoplasm (Class 1 C0.028; M0.081; S0.042; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 239 aa (-cTP 224)
Molecular Weight 27.42 kDA(-cTP )
PI 7.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help