PPDB

PPDB	The Plant Proteome Database

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AT1G58060.1 RNA helicase family protein

Lab Annot.

RNA helicase (perhaps plastid)
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G58050.1 11 Arabidopsis thaliana 0 1467 73 82 0 (0) C
AT2G35920.1 11 Arabidopsis thaliana 0 895 40 57 46 (29) _
AT2G35920.3 11 Arabidopsis thaliana 0 895 40 57 0 (0) C
Os04g35260.1 7 Oryza sativa 0 1116 59 77 3 (3) C
Os10g33275.1 7 Oryza sativa 0 874 40 58 2 (2) M
Os10g33275.2 7 Oryza sativa 0 874 40 58 2 (2) _
Zm00001eb082690_P001 agpv5 Zea mays 0 1109 57 74 0 (0) C
GRMZM2G399212_P01 3.21 Zea mays 0 852 41 58 14 (14) _
v1_GRMZM2G399212_P01 4a53 Zea mays 0 852 41 58 8 (8) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) ATPase(1) DEAD(1) DND1_DSRM(1) dsrm(1) HA2(1) Helicase_C(1)
TargetP:	Chloroplast (Class 1 C0.948; M0.121; S0.003; _0.047)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	1459 aa (-cTP 1422)
Molecular Weight	163.60 kDA(-cTP 159.69)
PI	5.85(-cTP 5.61)

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data