PPDB

PPDB	The Plant Proteome Database

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AT1G58050.1 RNA helicase family protein

Lab Annot.

RNA helicase protein
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G58060.1 11 Arabidopsis thaliana 0 1467 73 82 1 (1) C
AT2G35920.2 11 Arabidopsis thaliana 8E-179 853 39 57 0 (0) _
AT2G35920.1 11 Arabidopsis thaliana 4E-178 854 39 57 46 (29) _
Os04g35260.1 7 Oryza sativa 0 1402 49 67 3 (3) C
Os10g33275.2 7 Oryza sativa 6E-179 851 39 58 2 (2) _
Os10g33275.1 7 Oryza sativa 1E-176 851 39 58 2 (2) M
GRMZM2G013283_P02 3.21 Zea mays 0 1232 48 66 0 (0) C
Zm00001eb082690_P004 agpv5 Zea mays 0 1484 49 67 0 (0) C
Zm00001eb082690_P005 agpv5 Zea mays 0 1478 49 66 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(1) ATPase(1) DEAD(1) HA2(1) Helicase_C(1) OB_NTP_bind(1) T2SSE(1)
TargetP:	Chloroplast (Class 3 C0.823; M0.069; S0.003; _0.360)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1417 aa (-cTP 1356)
Molecular Weight	159.34 kDA(-cTP 152.47)
PI	7.37(-cTP 6.49)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data