PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G57670.1   Toll-Interleukin-Resistance (TIR) domain family protein

Lab Annot.
Mapman: 35.1.6 not assigned.no ontology.Toll-Interleukin-Resistance (TIR) domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G03300.1 11Arabidopsis thaliana5E-5516852730 (0)M
AT2G03030.1 11Arabidopsis thaliana5E-5517353730 (0)M
AT1G47370.1 11Arabidopsis thaliana6E-5117746720 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3169(3) DUF4062(1) K1(4) Phage_holin_5_1(4) TIR(1) TIR_2(1)
TargetP: Cytoplasm (Class 5 C0.096; M0.404; S0.040; _0.504)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 5 TMs
TAT position:
Length 387 aa (-cTP 366)
Molecular Weight 43.34 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help