PPDB

 The Plant Proteome Database

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AT1G57550.1   Low temperature and salt responsive protein family
Lab Annot.
Mapman: 20.2.3 stress.abiotic.drought/salt
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G38905.1 11Arabidopsis thaliana8E-195271860 (0)S
AT3G05880.1 11Arabidopsis thaliana1E-185162880 (0)S
AT3G05890.1 11Arabidopsis thaliana1E-165152880 (0)S
Os03g17790.1 7Oryza sativa7E-205170860 (0)S
Os05g04700.1 7Oryza sativa5E-164860830 (0)S
Os07g44180.1 7Oryza sativa2E-154854870 (0)S
v1_GRMZM2G020091_P01 4a53Zea mays2E-195466850 (0)S
v1_GRMZM2G179462_P01 4a53Zea mays1E-185168840 (0)S
GRMZM2G179462_P01 3.21Zea mays1E-185168840 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Adeno_E3B(1) Pmp3(1)
TargetP: Secreted (Class 1 C0.006; M0.096; S0.985; _0.082)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 52 aa (-cTP 44)
Molecular Weight 5.84 kDA(-cTP )
PI 5.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help