PPDB

 The Plant Proteome Database

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AT1G56680.1   Chitinase family protein
Lab Annot.
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56680.2 11Arabidopsis thaliana02801001000 (0)_
AT2G43600.2 11Arabidopsis thaliana5E-12127860740 (0)S
AT2G43600.1 11Arabidopsis thaliana5E-12027260740 (0)S
Os04g41680.1 7Oryza sativa9E-6326943570 (0)S
Os02g39330.1 7Oryza sativa6E-6025143580 (0)S
Os04g41620.1 7Oryza sativa1E-5520545623 (3)S
GRMZM2G005633_P02 3.21Zea mays1E-6427644571 (1)S
Zm00001eb425600_P001 agpv5Zea mays1E-6427644570 (0)S
v1_GRMZM2G005633_P01 4a53Zea mays1E-6427644571 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Chitin_bind_1(2) Glyco_hydro_19(2) SRTM1(1)
TargetP: Secreted (Class 1 C0.004; M0.014; S0.981; _0.073)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 280 aa (-cTP 258)
Molecular Weight 31.18 kDA(-cTP )
PI 8.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20682788(root secretome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help