PPDB

PPDB	The Plant Proteome Database

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AT1G56570.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G56570.2 11 Arabidopsis thaliana 0 611 100 100 0 (0) C
AT2G13600.1 11 Arabidopsis thaliana 7E-124 610 34 56 0 (0) _
AT2G22070.1 11 Arabidopsis thaliana 1E-123 625 34 55 0 (0) _
Os12g36620.1 7 Oryza sativa 7E-125 567 36 57 0 (0) _
Os11g29230.1 7 Oryza sativa 2E-124 576 34 59 4 (4) C
Os01g25270.1 7 Oryza sativa 5E-124 560 36 59 0 (0) M
v1_GRMZM2G131332_P01 4a53 Zea mays 1E-126 581 35 58 13 (13) C
Zm00001eb169740_P001 agpv5 Zea mays 1E-126 581 35 58 0 (0) C
GRMZM2G131332_P01 3.21 Zea mays 1E-126 581 35 58 28 (24) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(1) DYW_deaminase(1) PPR(11) PPR_1(11) PPR_2(10) PPR_3(7) PPR_long(4)
TargetP:	Chloroplast (Class 5 C0.423; M0.373; S0.041; _0.075)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	611 aa (-cTP 591)
Molecular Weight	68.28 kDA(-cTP 66.00)
PI	7.51(-cTP 6.52)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data