PPDB

The Plant Proteome Database

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AT1G56550.1   RhamnoGalacturonan speci%26#64257%3Bc Xylosyltransferase 1

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56550.2 11Arabidopsis thaliana03511001000 (0)M
AT4G01220.1 11Arabidopsis thaliana031776860 (0)C
AT4G01770.1 11Arabidopsis thaliana7E-17331375840 (0)_
Os05g32120.1 7Oryza sativa4E-14329364800 (0)_
Os05g43810.1 7Oryza sativa5E-1328725420 (0)C
Os01g69190.1 7Oryza sativa5E-0923024430 (0)M
Zm00001eb287010_P001 agpv5Zea mays5E-13926966830 (0)_
GRMZM2G085042_P01 3.21Zea mays1E-13826966830 (0)_
v1_GRMZM2G085042_P01 4a53Zea mays1E-13826966830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nucleotid_trans(1)
TargetP: Mitochondria (Class 3 C0.060; M0.550; S0.058; _0.018)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 383 aa (-cTP 304)
Molecular Weight 43.91 kDA(-cTP )
PI 9.42(-cTP )

Experimental Evidence

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View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
135Detail       leaf [A. thaliana] plastid thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data


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