PPDB

PPDB	The Plant Proteome Database

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AT1G56540.1 Disease resistance protein (TIR-NBS-LRR class) family

Lab Annot.

Disease resistance protein (TIR-NBS-LRR class) family
Mapman: 20.1.7 stress.biotic.PR-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G56540.2 11 Arabidopsis thaliana 0 932 100 100 0 (0) _
AT1G56510.1 11 Arabidopsis thaliana 0 1006 65 76 0 (0) M
AT1G56520.2 11 Arabidopsis thaliana 0 1021 62 73 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_23(2) AAA_29(1) AAA_5(1) ABC_tran(1)
TargetP:	Mitochondria (Class 4 C0.362; M0.611; S0.015; _0.064)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	1096 aa (-cTP 1077)
Molecular Weight	125.01 kDA(-cTP )
PI	6.57(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2126	Detail								leaf [A. thaliana]	Stroma stroma	cGep

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data