PPDB

The Plant Proteome Database

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AT1G56540.1   Disease resistance protein (TIR-NBS-LRR class) family

Lab Annot. Disease resistance protein (TIR-NBS-LRR class) family
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56540.2 11Arabidopsis thaliana09321001000 (0)_
AT1G56510.1 11Arabidopsis thaliana0100665760 (0)M
AT1G56520.2 11Arabidopsis thaliana0102162730 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_23(2) AAA_29(1) AAA_5(1) ABC_tran(1)
TargetP: Mitochondria (Class 4 C0.362; M0.611; S0.015; _0.064)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 1096 aa (-cTP 1077)
Molecular Weight 125.01 kDA(-cTP )
PI 6.57(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2126Detail       leaf [A. thaliana] Stroma stromacGep

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


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