PPDB

The Plant Proteome Database

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AT1G56460.2   HIT zinc finger and PAPA-1-like domain-containing protein

Lab Annot. HIT zinc finger ;PAPA-1-like conserved region
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56460.1 11Arabidopsis thaliana053294940 (0)C
AT1G56460.3 11Arabidopsis thaliana049493930 (0)C
AT2G47350.1 11Arabidopsis thaliana6E-6943639550 (0)_
Os12g37430.2 7Oryza sativa9E-6831746620 (0)C
Os12g37430.1 7Oryza sativa9E-6831746620 (0)C
Os03g59680.1 7Oryza sativa1E-5756934500 (0)C
Zm00001eb136960_P002 agpv5Zea mays4E-6432544600 (0)C
v1_GRMZM2G439884_P01 4a53Zea mays4E-6432544606 (6)C
GRMZM2G439884_P01 3.21Zea mays4E-6432544600 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5428(1) PAPA-1(2) YacG(1) zf-HIT(1)
TargetP: Chloroplast (Class 2 C0.892; M0.058; S0.006; _0.172)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 532 aa (-cTP 488)
Molecular Weight 59.17 kDA(-cTP 54.36)
PI 8.70(-cTP 8.07)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help