PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G56423.1   hypothetical protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56423.2 11Arabidopsis thaliana027093930 (0)S
Os03g19400.1 7Oryza sativa3E-9124459780 (0)S
v1_GRMZM2G179155_P01 4a53Zea mays1E-10024257750 (0)S
Zm00001eb014630_P002 agpv5Zea mays1E-10024257750 (0)S
GRMZM2G179155_P01 3.21Zea mays1E-10024257750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Bombinin(1) Gly-zipper_Omp(2) Gly-zipper_YMGG(1) Rick_17kDa_Anti(1)
TargetP: Secreted (Class 2 C0.003; M0.182; S0.902; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 270 aa (-cTP 239)
Molecular Weight 30.11 kDA(-cTP )
PI 4.83(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help