PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G56420.1   antigenic heat-stable protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12530.1 11Arabidopsis thaliana5E-1911239600 (0)_
Os12g37390.1 7Oryza sativa7E-5511272860 (0)_
Os03g12720.1 7Oryza sativa3E-0910832560 (0)_
v1_GRMZM2G138077_P01 4a53Zea mays9E-5916160740 (0)_
Zm00001eb137010_P001 agpv5Zea mays9E-5916160740 (0)_
GRMZM2G138077_P01 3.21Zea mays9E-5916160740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.194; M0.066; S0.147; _0.729)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 183 aa (-cTP 149)
Molecular Weight 20.42 kDA(-cTP )
PI 5.32(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help