PPDB

The Plant Proteome Database

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AT1G56400.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56400.2 11Arabidopsis thaliana047991911 (1)M
AT5G54820.1 11Arabidopsis thaliana1E-16547153690 (0)S
AT3G29830.1 11Arabidopsis thaliana7E-13947047651 (1)_
Os07g06900.1 7Oryza sativa9E-0821026460 (0)_
Os07g06730.1 7Oryza sativa5E-0720125500 (0)_
Os07g06670.1 7Oryza sativa3E-0627523430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(3) F-box-like(1) FBD(3) PhageP22-tail(1)
TargetP: Cytoplasm (Class 5 C0.053; M0.314; S0.086; _0.433)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 479 aa (-cTP 442)
Molecular Weight 55.35 kDA(-cTP )
PI 8.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help