PPDB

The Plant Proteome Database

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AT1G56345.1   Pseudouridine synthase family protein

Lab Annot.
Mapman: 29.1.30 protein.aa activation.pseudouridylate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56345.2 11Arabidopsis thaliana3E-711071001000 (0)S
AT3G19440.1 11Arabidopsis thaliana4E-0922426400 (0)M
Os12g37380.1 7Oryza sativa7E-10727755720 (0)M
Os09g01620.1 7Oryza sativa2E-1127526420 (0)M
Os06g50360.1 7Oryza sativa7E-1022227390 (0)C
Zm00001eb137040_P001 agpv5Zea mays9E-11027656710 (0)C
GRMZM2G046088_P02 3.21Zea mays9E-11027656710 (0)C
v1_GRMZM2G046088_P02 4a53Zea mays9E-11027656710 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCC(1) PseudoU_synth_2(1)
TargetP: Secreted (Class 4 C0.093; M0.045; S0.439; _0.171)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 322 aa (-cTP 294)
Molecular Weight 35.89 kDA(-cTP )
PI 6.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help