PPDB

The Plant Proteome Database

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AT1G56220.3   Dormancy/auxin associated family protein

Lab Annot. dormancy/auxin associated protein
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56220.5 11Arabidopsis thaliana9E-11416598980 (0)_
AT1G56220.1 11Arabidopsis thaliana4E-9314097973 (3)_
AT1G56220.4 11Arabidopsis thaliana1E-871251001003 (3)_
Os03g22270.1 7Oryza sativa5E-3014250610 (0)_
Os03g22270.2 7Oryza sativa4E-2310453630 (0)_
Os03g22270.3 7Oryza sativa4E-2310453630 (0)_
GRMZM2G073755_P01 3.21Zea mays3E-2813350600 (0)_
Zm00001eb016420_P001 agpv5Zea mays3E-2813350600 (0)_
v1_GRMZM2G073755_P01 4a53Zea mays3E-2813350600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_repressed(1) Herpes_LP(1)
TargetP: Cytoplasm (Class 4 C0.053; M0.303; S0.036; _0.655)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 165 aa (-cTP 161)
Molecular Weight 17.78 kDA(-cTP )
PI 9.79(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help