PPDB

The Plant Proteome Database

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AT1G56200.1   embryo defective 1303

Lab Annot. EMB1303 (EMBRYO DEFECTIVE 1303)
Mapman: 33.99 development.unspecified
Curated Location plastid (Pubmed: 23198870 19581937 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56200.2 11Arabidopsis thaliana9E-10415497980 (0)C
AT1G30475.2 11Arabidopsis thaliana1E-2613657710 (0)C
AT1G30475.3 11Arabidopsis thaliana1E-2613657710 (0)C
Os02g05890.1 7Oryza sativa2E-0711539532 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GRP(1)
TargetP: Chloroplast (Class 1 C0.989; M0.009; S0.006; _0.036)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 154 aa (-cTP 86)
Molecular Weight 15.99 kDA(-cTP 9.04)
PI 9.34(-cTP 4.81)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data


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