PPDB

The Plant Proteome Database

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AT1G56180.1   ATP-dependent zinc metalloprotease

Lab Annot. Zn-binding domain VIRESCENT3 (VIR3) (suggested protease)
Mapman: 35.2 not assigned.unknown
Curated Location thylakoid (Pubmed: 26702056 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56180.2 11Arabidopsis thaliana029699990 (0)C
AT5G27290.1 11Arabidopsis thaliana7E-22167345543 (43)M
AT2G21960.1 11Arabidopsis thaliana7E-161683348157 (151)C
Os02g07250.1 7Oryza sativa3E-17634868820 (0)C
Os04g54640.1 7Oryza sativa1E-20296304312 (12)M
Os01g28540.1 7Oryza sativa2E-1916732524 (4)M
Zm00001eb233060_P002 agpv5Zea mays7E-17134267820 (0)C
v1_GRMZM2G128012_P01 4a53Zea mays7E-17134267823 (3)C
GRMZM2G128012_P01 3.21Zea mays7E-17134267824 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_M50(1) Peptidase_M50B(1)
TargetP: Chloroplast (Class 3 C0.803; M0.228; S0.020; _0.027)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 389 aa (-cTP 343)
Molecular Weight 42.59 kDA(-cTP 37.50)
PI 8.22(-cTP 5.86)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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