PPDB

PPDB	The Plant Proteome Database

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AT1G56170.1 nuclear factor Y%2C subunit C2

Lab Annot.

Mapman: 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5

Curated Location

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G56170.2 11 Arabidopsis thaliana 2E-149 199 100 100 0 (0) _
AT1G08970.1 11 Arabidopsis thaliana 2E-67 187 60 73 14 (14) _
AT1G08970.2 11 Arabidopsis thaliana 2E-67 187 60 73 14 (14) _
Os02g07450.1 7 Oryza sativa 4E-74 199 64 75 0 (0) _
Os02g07450.2 7 Oryza sativa 4E-74 199 64 75 0 (0) _
Os06g45640.1 7 Oryza sativa 6E-68 132 75 88 0 (0) _
Zm00001eb389900_P003 agpv5 Zea mays 2E-69 146 69 83 0 (0) _
Zm00001eb389900_P001 agpv5 Zea mays 2E-69 146 69 83 0 (0) _
Zm00001eb389900_P002 agpv5 Zea mays 2E-69 146 69 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) CENP-X(1) DUF1161(1) Histone(1)
TargetP:	Cytoplasm (Class 3 C0.053; M0.271; S0.057; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	199 aa (-cTP 145)
Molecular Weight	23.12 kDA(-cTP )
PI	5.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data