PPDB

The Plant Proteome Database

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AT1G56170.1   nuclear factor Y%2C subunit C2

Lab Annot.
Mapman: 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5
Curated Location
TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56170.2 11Arabidopsis thaliana2E-1491991001000 (0)_
AT1G08970.1 11Arabidopsis thaliana2E-67187607314 (14)_
AT1G08970.2 11Arabidopsis thaliana2E-67187607314 (14)_
Os02g07450.1 7Oryza sativa4E-7419964750 (0)_
Os02g07450.2 7Oryza sativa4E-7419964750 (0)_
Os06g45640.1 7Oryza sativa6E-6813275880 (0)_
Zm00001eb389900_P003 agpv5Zea mays2E-6914669830 (0)_
Zm00001eb389900_P001 agpv5Zea mays2E-6914669830 (0)_
Zm00001eb389900_P002 agpv5Zea mays2E-6914669830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) CENP-X(1) DUF1161(1) Histone(1)
TargetP: Cytoplasm (Class 3 C0.053; M0.271; S0.057; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 199 aa (-cTP 145)
Molecular Weight 23.12 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help