PPDB

 The Plant Proteome Database

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AT1G55960.1   Polyketide cyclase/dehydrase and lipid transport superfamily protein
Lab Annot. Polyketide cyclase/dehydrase
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55960.2 11Arabidopsis thaliana040393930 (0)C
AT3G13062.2 11Arabidopsis thaliana039968770 (0)_
AT3G13062.1 11Arabidopsis thaliana040367770 (0)_
Os02g26860.1 7Oryza sativa8E-10333347650 (0)_
Os04g02910.3 7Oryza sativa9E-4030135500 (0)_
Os04g02910.1 7Oryza sativa9E-4032134490 (0)M
Zm00001eb240920_P001 agpv5Zea mays3E-10631750680 (0)M
v1_GRMZM2G028763_P01 4a53Zea mays3E-10631750680 (0)M
GRMZM2G028763_P01 3.21Zea mays3E-10631750680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATP-synt_8(1) START(1)
TargetP: Chloroplast (Class 5 C0.260; M0.075; S0.009; _0.210)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 403 aa (-cTP 331)
Molecular Weight 45.32 kDA(-cTP 37.42)
PI 9.35(-cTP 9.36)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help