PPDB

PPDB	The Plant Proteome Database

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AT1G55850.1 cellulose synthase like E1

Lab Annot.

cellulose synthase like E1
Mapman: 10.2.1 cell wall.cellulose synthesis.cellulose synthase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G24000.1 11 Arabidopsis thaliana 2E-168 706 38 57 6 (6) M
AT4G23990.1 11 Arabidopsis thaliana 2E-164 722 38 55 16 (16) M
AT4G24010.1 11 Arabidopsis thaliana 1E-162 696 38 57 0 (0) _
Os09g30130.1 7 Oryza sativa 0 729 49 69 0 (0) M
Os09g30120.1 7 Oryza sativa 0 731 49 67 0 (0) _
Os02g49332.1 7 Oryza sativa 0 731 50 67 0 (0) _
Zm00001eb316070_P001 agpv5 Zea mays 0 727 51 68 0 (0) M
GRMZM2G014558_P01 3.21 Zea mays 0 727 51 68 2 (2) M
v1_GRMZM2G014558_P01 4a53 Zea mays 0 727 51 68 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cellulose_synt(2)
TargetP:	Cytoplasm (Class 2 C0.007; M0.263; S0.034; _0.989)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	6 TMs
TAT position:
Length	729 aa (-cTP 720)
Molecular Weight	82.35 kDA(-cTP )
PI	6.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1616	Detail								Natural Senescence leaf [A. thaliana]
1617	Detail								[A. thaliana]		m48
1618	Detail								[A. thaliana]		m48
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
1716	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k5-1
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data