PPDB

The Plant Proteome Database

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AT1G55820.1   lysine-specific demethylase%2C putative (DUF1296)

Lab Annot.
Mapman: 35.1.41 not assigned.no ontology.hydroxyproline rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13222.1 11Arabidopsis thaliana3E-13063643541 (0)_
AT3G07660.1 11Arabidopsis thaliana2E-142443140459 (137)_
AT4G18150.1 11Arabidopsis thaliana2E-0713532510 (0)_
Os09g08670.1 7Oryza sativa7E-1723534429 (9)M
Os06g10430.1 7Oryza sativa1E-095750704 (4)_
Os06g10430.3 7Oryza sativa1E-095750704 (4)_
v1_GRMZM2G045854_P01 4a53Zea mays2E-1619933520 (0)_
GRMZM2G045854_P01 3.21Zea mays2E-1619933520 (0)_
Zm00001eb177380_P003 agpv5Zea mays4E-1619933520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1296(1)
TargetP: Cytoplasm (Class 2 C0.020; M0.284; S0.017; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 575 aa (-cTP 550)
Molecular Weight 61.88 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help