PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G55720.1 vacuolar cation/proton exchanger

Lab Annot.

Mapman: 34.21 transport.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55720.2 11 Arabidopsis thaliana 0 448 100 100 0 (0) S
AT1G55730.1 11 Arabidopsis thaliana 0 436 88 92 0 (0) _
AT1G55730.2 11 Arabidopsis thaliana 0 436 88 92 0 (0) _
Os03g27960.1 7 Oryza sativa 0 391 69 83 0 (0) _
Os03g27960.2 7 Oryza sativa 0 389 70 83 0 (0) _
Os04g55940.2 7 Oryza sativa 0 413 64 78 0 (0) _
GRMZM2G053004_P03 3.21 Zea mays 0 386 70 82 0 (0) _
v1_GRMZM2G053004_P02 4a53 Zea mays 0 386 70 82 0 (0) _
Zm00001eb392740_P002 agpv5 Zea mays 0 386 70 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FA_desaturase(2) Na_Ca_ex(2)
TargetP:	Secreted (Class 3 C0.017; M0.075; S0.650; _0.110)
Predotar:
Subcel. Location:
TM-HMM prediction:	10 TMs
Aramemnon:	11 TMs
TAT position:
Length	467 aa (-cTP 395)
Molecular Weight	51.84 kDA(-cTP )
PI	5.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data