PPDB

PPDB	The Plant Proteome Database

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AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein

Lab Annot.

Mapman: 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13350.1 11 Arabidopsis thaliana 3E-91 312 47 65 0 (0) _
AT1G04880.1 11 Arabidopsis thaliana 1E-54 317 33 50 0 (0) _
AT1G76110.1 11 Arabidopsis thaliana 4E-51 297 36 53 0 (0) _
Os02g27060.1 7 Oryza sativa 9E-49 288 36 53 0 (0) _
Os02g27060.2 7 Oryza sativa 2E-48 299 35 52 0 (0) _
Os09g37250.1 7 Oryza sativa 2E-46 281 33 55 0 (0) _
Zm00001eb203110_P002 agpv5 Zea mays 4E-42 298 30 50 0 (0) _
Zm00001eb203110_P003 agpv5 Zea mays 9E-42 298 30 50 0 (0) _
Zm00001eb203110_P001 agpv5 Zea mays 9E-42 298 30 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ARID(1) HMG_box(1) HMG_box_2(1) HMG_box_5(1) nos_propeller_2(1) Rib_hydrolayse(2
TargetP:	Cytoplasm (Class 4 C0.172; M0.121; S0.239; _0.623)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	337 aa (-cTP 323)
Molecular Weight	38.05 kDA(-cTP )
PI	8.54(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)

Comparative Proteomics Data