PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G55620.2 chloride channel F

Lab Annot.

CLC-F (CHLORIDE CHANNEL F); voltage-gated chloride channel
Mapman: 34.18 transport.unspecified anions

Curated Location

golgi (Pubmed: 17872921 )

TAIR curated location: chloroplast16115625

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55620.1 11 Arabidopsis thaliana 0 585 100 100 0 (0) _
AT4G35440.1 11 Arabidopsis thaliana 1E-128 665 38 55 4 (2) M
AT4G35440.2 11 Arabidopsis thaliana 9E-128 631 39 56 4 (2) M
Os02g48880.1 7 Oryza sativa 0 744 66 77 0 (0) _
Os08g38980.1 7 Oryza sativa 0 769 64 75 0 (0) C
Os02g48880.2 7 Oryza sativa 0 624 70 81 0 (0) _
Zm00001eb252970_P003 agpv5 Zea mays 0 388 84 91 0 (0) _
GRMZM2G113911_P02 3.21 Zea mays 0 432 64 76 0 (0) M
v1_GRMZM2G113911_P01 4a53 Zea mays 0 432 64 76 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBS(2) Romo1(4) Voltage_CLC(2)
TargetP:	Cytoplasm (Class 2 C0.190; M0.118; S0.027; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	8 TMs
Aramemnon:	10 TMs
TAT position:
Length	781 aa (-cTP 690)
Molecular Weight	83.55 kDA(-cTP )
PI	6.28(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)
22430844(Golgi-cell-culture)

Comparative Proteomics Data