PPDB

PPDB	The Plant Proteome Database

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AT1G55620.1 chloride channel F

Lab Annot.

CLC-F (CHLORIDE CHANNEL F); voltage-gated chloride channel
Mapman: 34.18 transport.unspecified anions

Curated Location

golgi (Pubmed: 17872921 )

TAIR curated location: chloroplast16115625

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55620.2 11 Arabidopsis thaliana 0 585 100 100 0 (0) _
AT4G35440.1 11 Arabidopsis thaliana 3E-107 581 39 55 4 (2) M
AT4G35440.2 11 Arabidopsis thaliana 6E-107 545 40 56 4 (2) M
Os08g38980.1 7 Oryza sativa 0 597 69 79 0 (0) C
Os02g48880.1 7 Oryza sativa 0 593 68 80 0 (0) _
Os02g48880.2 7 Oryza sativa 0 473 74 85 0 (0) _
Zm00001eb034010_P001 agpv5 Zea mays 0 431 64 76 0 (0) M
GRMZM2G113911_P02 3.21 Zea mays 0 431 64 76 0 (0) M
v1_GRMZM2G113911_P01 4a53 Zea mays 0 431 64 76 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBS(2) Voltage_CLC(1)
TargetP:	Cytoplasm (Class 4 C0.122; M0.339; S0.022; _0.701)
Predotar:
Subcel. Location:
TM-HMM prediction:	7 TMs
Aramemnon:	10 TMs
TAT position:
Length	585 aa (-cTP 504)
Molecular Weight	62.55 kDA(-cTP )
PI	8.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)
22430844(Golgi-cell-culture)

Comparative Proteomics Data