PPDB

The Plant Proteome Database

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AT1G55590.1   RNI-like superfamily protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G17020.1 11Arabidopsis thaliana2E-8460833524 (4)_
AT2G17020.3 11Arabidopsis thaliana3E-7955833530 (0)M
AT2G17020.2 11Arabidopsis thaliana9E-6941635550 (0)M
Os08g39060.1 7Oryza sativa2E-13459142590 (0)_
Os08g39060.2 7Oryza sativa1E-10743445620 (0)_
Os08g39060.3 7Oryza sativa1E-10743445620 (0)_
Zm00001eb199550_P002 agpv5Zea mays1E-12759041590 (0)_
GRMZM2G048665_P01 3.21Zea mays1E-12759041590 (0)_
v1_GRMZM2G048665_P01 4a53Zea mays1E-12759041590 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(2) LRR_4(12) LRR_6(10)
TargetP: Cytoplasm (Class 2 C0.032; M0.122; S0.056; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 607 aa (-cTP 527)
Molecular Weight 66.26 kDA(-cTP )
PI 6.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help